Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852297.1_cds_XP_016511799.1_24504
CDS Infomation

[gene=LOC107828921] [db_xref=GeneID:107828921] [protein=pentatricopeptide repeat-containing protein At5g66520-like isoform X1] [protein_id=XP_016511799.1] [location=complement(3976..5505)] [gbkey=CDS]
Sequence

ATGATCCGAAAAGCAGTCAGCGAAACTCACTCTGCCTTAACGCCCTTCACACAAAAGTGC
AGAACGCTCAACCACCTAAAAGAACTCCACTGCCAACTCCTCAAATTCTACCTCCCTGAA
ACTCCATCAGCCATTGCCCCACTTCTTTCATTTGCCGTCAATTCTAGCAATCCTTCTTTC
TTTAATTATTTGCGTATTGTGTTTCAAAATCTTGGCTACCAAAGTACTTTTCTGTACAAT
ACCATGATCAGAGGATACATGCAATCAGATTTGCCGATACCAGCAGTTCTATGCTACAAA
GATATGCTAAGAAATAAGCTTATTGTAAATAATTATACTTTTCCGCCATTGATAAAGGCT
TGTTCAATGATTTTAAATGAGTTTGGTCAACATGGTTTTTCAGTGCATGCCCATTTACTG
AAATTGGGATTACAACATGACCGGTTTATTGTTGCAGCATTGATTGAATTTTATTCCCTA
AATATCGAGATGGACAGAGCACGTATGTTGTTTGATGAAATTACCAACAGAGATGTGGTT
ATGTGGACCAGCATGATTGATGGATATGGGAAAATAGGGGAGGTGGGGAAAGCTAGATTG
TTGTTTGATGAAATGCCAGAGAGAAATGTGATTTCTTGGAGTGCAATGATGGCAGCATAT
TCACGGGCTAGTGATTTTAAGGAGGTGCTTTGCTTGTATCGGAGGATGGAAGAAGACGGT
CTTAAGCCGAACGAGTCTGTTCTTGTGAGTATTCTCACGGCTTGTGCTCATCTAGGTGCA
CTGGCACAAGGTCTTTTGGTACATTCATTTGCTAAGCATTATAATTACGAGTCAAACCCA
ATATTGGCTACTGCATTAGTTGACATGTACTCTAAATGTGGTAGAATGGAGTCGGCTTCA
TCAGTTTTTGAAGCGATGACTTATAAGGATAGTGGAGCATGGAATGCCATCATATCAGGC
TTTGCAATGAATGGAAATGCAGTGAAATCGGTTCAATTGTTCGATAGGATGATAGCAAGC
GGGAATCGGCCAAATGAAACCACTTTTGTTGCTCTGCTCTCTGCTTGCACTCATGCAGAA
ATGGTCGACGTAGGTCTTTCACTGTTTGCAAGAATGGGCAGTGTTTATGGGGTTGAACCC
AGGTTTGAACATCGCGCCTGCGTGGTAGACCTGTTAGCAAGAGCTGGTAAGCTCGAGGAT
GCTGAGAAGTTCATTGAGGAGAACATGGGAGGGATAGAGAAAGCGGATGCTAATGTATGG
GGAGCTTTACTTGGTGCTTGTAGGGTATATGGTAATGTTGAAGTAGGTGATAGGATATGG
AGAAAGCTGTCTAACATGAAGGTAATTGACCATGGTACTTGTGTACTTGCATACAATATA
TACAGGGAAGCTGGTCGAGATGTAGAAGCTAAGTGTGTTAGGGAATTGATCGAGGAGATG
AGGACAAAGAAGCAGCCTGGATGTAGCGTCATAGAGGTAAATGATATAGCTGAGAAATCC
TTTGCAAGTGATTTATTACATCCTAAGTAA

Peptide Sequence

PEP ID

XP_016511799.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Nicotiana tabacum]
Sequence

MIRKAVSETHSALTPFTQKCRTLNHLKELHCQLLKFYLPETPSAIAPLLSFAVNSSNPSF
FNYLRIVFQNLGYQSTFLYNTMIRGYMQSDLPIPAVLCYKDMLRNKLIVNNYTFPPLIKA
CSMILNEFGQHGFSVHAHLLKLGLQHDRFIVAALIEFYSLNIEMDRARMLFDEITNRDVV
MWTSMIDGYGKIGEVGKARLLFDEMPERNVISWSAMMAAYSRASDFKEVLCLYRRMEEDG
LKPNESVLVSILTACAHLGALAQGLLVHSFAKHYNYESNPILATALVDMYSKCGRMESAS
SVFEAMTYKDSGAWNAIISGFAMNGNAVKSVQLFDRMIASGNRPNETTFVALLSACTHAE
MVDVGLSLFARMGSVYGVEPRFEHRACVVDLLARAGKLEDAEKFIEENMGGIEKADANVW
GALLGACRVYGNVEVGDRIWRKLSNMKVIDHGTCVLAYNIYREAGRDVEAKCVRELIEEM
RTKKQPGCSVIEVNDIAEKSFASDLLHPK

Transcript Sequence

Gene sequence data has not been registered.